{% extends 'base.html' %} {% block scripts %} {{ super() }} {% if debug %} {% else %} {% endif %} {% endblock %} {% block onload %} {{ super() }} dgenies.run.init('{{ s_id }}',{{ allowed_ext }}, {{ max_upload_file_size }}, '{{ target }}', '{{ query }}', '{{ backup }}', '{{ batch }}', {{ tools_ava }}); {% endblock %} {% block content %} {% set fnote = 1 %} {% if inforun is not none %}
{{ inforun.message | safe }}
{% endif %}

Launch map analysis

{% if mode == "webserver" %} {% endif %} {# Tab 1 #} {% set fnote_tab = fnote %} {% if tools | length > 1 %} {% else %} {% endif %} {% if tools | length > 1 %} {% for tool in tools_names %} {% set tool_loop = loop %} {% if tools[tool].options %} {% for opt in tools_options[tool] %} {% set outer_loop = loop %} {% endfor %} {% endif %} {% endfor %} {% else %} {% set tool = tools_names[0] %} {% if tools[tool].options %} {% for opt in tools[tool].options %} {% endfor %} {% endif %} {% endif %} {# Tab 2 #} {% set fnote_tab = fnote %} {# Tab 3 #} {% set fnote_tab = fnote %} {% for tool in tools_names %} {% if tools[tool].options %} {% else %} {% endif %} {% endfor %}
New alignment
Plot alignment
Batch alignments
{% for tool in tools_names %} {% endfor %}
{% for tool in tools_names %} {% endfor %}
{{ opt.label }}  {% for entry in opt['entries'] %}
{% endfor %}
{{ opt.label }}  {% for entry in opt['entries'] %}
{% endfor %}

- or -

Possible values for tool and options keys
Tool Option ids (to use with options=){{ fnote_tab }}{% set fnote_tab = fnote_tab + 1 %}
{{ tools[tool].label | capitalize }}
({% if loop.index0 == 0 %}{% endif %}tool={{ tool }})
    {% for opt in tools[tool].options %} {% set outer_loop = loop %}
  • {{ opt.label }}{% if opt.type == "radio" %} (mutually exclusive){% endif %}:
    • {% for entry in opt['entries'] %}
    • {{ outer_loop.index0 }}-{{ loop.index0 }}: {{ entry.label }} 
    • {% endfor %}
    {% endfor %}
No option
{% if example_align %} {% endif %} {% if example_backup %} {% endif %} {% if example_batch %} {% endif %}
{% set fnote = 1 %} {% if mode == "webserver" %}

{{ fnote }} We will send you results by mail.

{% set fnote = fnote + 1 %} {% endif %}
{% set fnote_tab = fnote %}

{{ fnote_tab }} Can be gzipped. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gzor .fna.gz

{% set fnote_tab = fnote_tab + 1 %}
{% set fnote_tab = fnote %}

{{ fnote_tab }} In PAF or MAF format. Must end with .paf, .maf

{% set fnote_tab = fnote_tab + 1 %}

{{ fnote_tab }} Fasta file or index built by our tool. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gz, .fna.gz or .idx.

{% set fnote_tab = fnote_tab + 1 %}

{{ fnote_tab }} TAR file from a previous run or built following this documentation. Must ends with .tar or .tar.gz.

{% set fnote_tab = fnote_tab + 1 %}
{% set fnote_tab = fnote %}

{{ fnote_tab }} Text file following batch format. Must end with .txt

{% set fnote_tab = fnote_tab + 1 %}

{{ fnote_tab }} Look at the batch format page for full description. Default options appear in bold

{% set fnote_tab = fnote_tab + 1 %}
{% endblock %}